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      Alzheimer's Disease Detection Through Whole-Brain 3D-CNN MRI

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          Abstract

          The projected burden of dementia by Alzheimer's disease (AD) represents a looming healthcare crisis as the population of most countries grows older. Although there is currently no cure, it is possible to treat symptoms of dementia. Early diagnosis is paramount to the development and success of interventions, and neuroimaging represents one of the most promising areas for early detection of AD. We aimed to deploy advanced deep learning methods to determine whether they can extract useful AD biomarkers from structural magnetic resonance imaging (sMRI) and classify brain images into AD, mild cognitive impairment (MCI), and cognitively normal (CN) groups. We tailored and trained Convolutional Neural Networks (CNNs) on sMRIs of the brain from datasets available in online databases. Our proposed method, ADNet, was evaluated on the CADDementia challenge and outperformed several approaches in the prior art. The method's configuration with machine-learning domain adaptation, ADNet-DA, reached 52.3% accuracy. Contributions of our study include devising a deep learning system that is entirely automatic and comparatively fast, presenting competitive results without using any patient's domain-specific knowledge about the disease. We were able to implement an end-to-end CNN system to classify subjects into AD, MCI, or CN groups, reflecting the identification of distinctive elements in brain images. In this context, our system represents a promising tool in finding biomarkers to help with the diagnosis of AD and, eventually, many other diseases.

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                Author and article information

                Contributors
                Journal
                Front Bioeng Biotechnol
                Front Bioeng Biotechnol
                Front. Bioeng. Biotechnol.
                Frontiers in Bioengineering and Biotechnology
                Frontiers Media S.A.
                2296-4185
                30 October 2020
                2020
                : 8
                : 534592
                Affiliations
                [1] 1Institute of Computing, University of Campinas , Campinas, Brazil
                [2] 2CPQD , Campinas, Brazil
                [3] 3Laboratory of Behavioral Neuroscience, National Institute on Aging, National Institutes of Health, Intramural Research Program (NIA/NIH/IRP) , Baltimore, MD, United States
                [4] 4Seaman Family MR Research Center, Cumming School of Medicine, University of Calgary , Calgary, AB, Canada
                Author notes

                Edited by: Concetto Spampinato, University of Catania, Italy

                Reviewed by: Amit Alexander, National Institute of Pharmaceutical Education and Research, India; Carmelo Pino, University of Catania, Italy

                *Correspondence: Guilherme Folego gfolego@ 123456gmail.com

                This article was submitted to Biomaterials, a section of the journal Frontiers in Bioengineering and Biotechnology

                †Some data used in preparation of this article were obtained from the Alzheimer's Disease Neuroimaging Initiative (ADNI) database ( https://adni.loni.usc.edu). As such, the investigators within the ADNI contributed to the design and implementation of ADNI and/or provided data but did not participate in analysis or writing of this report

                ‡Some data used in the preparation of this article were obtained from the Australian Imaging Biomarkers and Lifestyle flagship study of aging (AIBL) funded by the Commonwealth Scientific and Industrial Research Organization (CSIRO) which was made available at the ADNI database

                Article
                10.3389/fbioe.2020.534592
                7661929
                33195111
                e627f8f5-493f-476d-a4cb-0695f0e4cf7e
                Copyright © 2020 Folego, Weiler, Casseb, Pires and Rocha.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 13 February 2020
                : 18 September 2020
                Page count
                Figures: 5, Tables: 7, Equations: 0, References: 59, Pages: 14, Words: 10975
                Funding
                Funded by: Conselho Nacional de Desenvolvimento Científico e Tecnológico 10.13039/501100003593
                Award ID: 304497/2018-5
                Funded by: Fundação de Amparo à Pesquisa do Estado de São Paulo 10.13039/501100001807
                Award ID: 2017/12646-3
                Categories
                Bioengineering and Biotechnology
                Original Research

                alzheimer's disease,computer aided diagnosis,artificial intelligence,computer vision,deep learning,convolutional neural networks,image classification,magnetic resonance imaging

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