Keegan Korthauer: keegan@jimmy.harvard.edu
Patrick K. Kimes: patrick.kimes@gmail.com
Claire Duvallet: duvallet@mit.edu
Alejandro Reyes: alejandro.reyes.ds@gmail.com
Ayshwarya Subramanian: ayshwaryasubramanian@gmail.com
Mingxiang Teng: tengmx@gmail.com
Chinmay Shukla: chinmay21191@gmail.com
Eric J. Alm: ejalm@mit.edu
Stephanie C. Hicks:
ORCID: http://orcid.org/0000-0002-7858-0231
shicks19@jhu.edu
Journal ID (nlm-ta): Genome Biol
Journal ID (iso-abbrev): Genome Biol
Title:
Genome Biology
Publisher:
BioMed Central
(London
)
ISSN
(Print):
1474-7596
ISSN
(Electronic):
1474-760X
Publication date
(Electronic):
4
June
2019
Publication date PMC-release: 4
June
2019
Publication date Collection: 2019
Volume: 20
Electronic Location Identifier: 118
Affiliations
[1
]ISNI 0000 0001 2106 9910, GRID grid.65499.37, Department of Data Sciences, Dana-Farber Cancer Institute, ; 450 Brookline Avenue, Boston, 02215 USA
[2
]ISNI 000000041936754X, GRID grid.38142.3c, Department of Biostatistics, Harvard T.H. Chan School of Public Health, ; 677 Huntington Avenue, Boston, 02215 USA
[3
]ISNI 0000 0001 2341 2786, GRID grid.116068.8, Department of Biological Engineering, MIT, ; 77 Massachusetts Avenue, Cambridge, USA
[4
]ISNI 0000 0001 2341 2786, GRID grid.116068.8, Center for Microbiome Informatics and Therapeutics, MIT, ; 77 Massachusetts Avenue, Cambridge, USA
[5
]GRID grid.66859.34, Broad Institute, ; 415 Main Street, Cambridge, USA
[6
]ISNI 0000 0000 9891 5233, GRID grid.468198.a, Department of Biostatistics & Bioinformatics, Moffitt Cancer Center, ; 12902 Magnolia Drive, Tampa, 33612 USA
[7
]ISNI 000000041936754X, GRID grid.38142.3c, Biological and Biomedical Sciences Program, Harvard University, ; Boston, USA
[8
]ISNI 0000 0001 2171 9311, GRID grid.21107.35, Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health, ; 615 N. Wolfe Street, Baltimore, 21205 USA
Author information
Article
Publisher ID:
1716
DOI: 10.1186/s13059-019-1716-1
PMC ID: 6547503
PubMed ID: 31164141
SO-VID: 799e228e-4d11-4732-a6d7-47c90684897b
Copyright © © The Author(s) 2019
License:
Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0
International License(
http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided
you give appropriate credit to the original author(s) and the source, provide a link
to the Creative Commons license, and indicate if changes were made. The Creative Commons
Public Domain Dedication waiver(
http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
Funded by: FundRef http://dx.doi.org/10.13039/100000051, National Human Genome Research Institute;
Award ID: U41HG004059
Funded by: FundRef http://dx.doi.org/10.13039/100000051, National Human Genome Research Institute;
Award ID: R02HG005220
Funded by: FundRef http://dx.doi.org/10.13039/100000057, National Institute of General Medical Sciences;
Award ID: R01GM083084
Funded by: National Institue of General Medical Sciences
Award ID: R01GM103552
Funded by: FundRef http://dx.doi.org/10.13039/100000051, National Human Genome Research Institute;
Award ID: R00HG009007
Funded by: Chan Zuckerberg Initiative DAF
Award ID: 2018-183142
Funded by: Chan Zuckerberg Initiative DAF
Award ID: 2018-183560
Funded by: Broadnext10
Award ID: Broadnext10
Funded by: FundRef http://dx.doi.org/10.13039/100000054, National Cancer Institute;
Award ID: P30CA076292
Funded by: FundRef http://dx.doi.org/10.13039/100006132, Office of Science;
Award ID: DE-AC02-05CH11231