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      Live-animal imaging of native hematopoietic stem and progenitor cells

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          Abstract

          The biology of hematopoietic stem cells (HSCs) has predominantly been studied under transplantation conditions 1, 2 . Particularly challenging has been the study of dynamic HSC behaviors given that live animal HSC visualization in the native niche still represents an elusive goal in the field. Here, we describe a dual genetic strategy in mice that restricts reporter labeling to a subset of the most quiescent long-term HSCs (LT-HSCs) and that is compatible with current intravital imaging approaches in the calvarial bone marrow (BM) 35 . We find that this subset of LT-HSCs resides in close proximity to both sinusoidal blood vessels and the endosteal surface. In contrast, multipotent progenitor cells (MPPs) display a broader distance distribution from the endosteum and are more likely to be associated with transition zone vessels. LT-HSCs are not found in BM niches with the deepest hypoxia and instead are found in similar hypoxic environments as MPPs. In vivo time-lapse imaging reveals that LT-HSCs display limited motility at steady-state. Following activation, LT-HSCs display heterogenous responses, with some cells becoming highly motile and a fraction of HSCs expanding clonally within spatially restricted domains. These domains have defined characteristics, as HSC expansion is found almost exclusively in a subset of BM cavities exhibiting bone-remodeling activities. In contrast, cavities with low bone-resorbing activities do not harbor expanding HSCs. These findings point to a new degree of heterogeneity within the BM microenvironment, imposed by the stages of bone turnover. Overall, our approach enables direct visualization of HSC behaviors and dissection of heterogeneity in HSC niches.

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          Most cited references37

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          Birth and death of bone cells: basic regulatory mechanisms and implications for the pathogenesis and treatment of osteoporosis.

          The adult skeleton regenerates by temporary cellular structures that comprise teams of juxtaposed osteoclasts and osteoblasts and replace periodically old bone with new. A considerable body of evidence accumulated during the last decade has shown that the rate of genesis of these two highly specialized cell types, as well as the prevalence of their apoptosis, is essential for the maintenance of bone homeostasis; and that common metabolic bone disorders such as osteoporosis result largely from a derangement in the birth or death of these cells. The purpose of this article is 3-fold: 1) to review the role and the molecular mechanism of action of regulatory molecules, such as cytokines and hormones, in osteoclast and osteoblast birth and apoptosis; 2) to review the evidence for the contribution of changes in bone cell birth or death to the pathogenesis of the most common forms of osteoporosis; and 3) to highlight the implications of bone cell birth and death for a better understanding of the mechanism of action and efficacy of present and future pharmacotherapeutic agents for osteoporosis.
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            Clonal dynamics of native haematopoiesis.

            It is currently thought that life-long blood cell production is driven by the action of a small number of multipotent haematopoietic stem cells. Evidence supporting this view has been largely acquired through the use of functional assays involving transplantation. However, whether these mechanisms also govern native non-transplant haematopoiesis is entirely unclear. Here we have established a novel experimental model in mice where cells can be uniquely and genetically labelled in situ to address this question. Using this approach, we have performed longitudinal analyses of clonal dynamics in adult mice that reveal unprecedented features of native haematopoiesis. In contrast to what occurs following transplantation, steady-state blood production is maintained by the successive recruitment of thousands of clones, each with a minimal contribution to mature progeny. Our results demonstrate that a large number of long-lived progenitors, rather than classically defined haematopoietic stem cells, are the main drivers of steady-state haematopoiesis during most of adulthood. Our results also have implications for understanding the cellular origin of haematopoietic disease.
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              Is Open Access

              TANGO: a generic tool for high-throughput 3D image analysis for studying nuclear organization

              Motivation: The cell nucleus is a highly organized cellular organelle that contains the genetic material. The study of nuclear architecture has become an important field of cellular biology. Extracting quantitative data from 3D fluorescence imaging helps understand the functions of different nuclear compartments. However, such approaches are limited by the requirement for processing and analyzing large sets of images. Results: Here, we describe Tools for Analysis of Nuclear Genome Organization (TANGO), an image analysis tool dedicated to the study of nuclear architecture. TANGO is a coherent framework allowing biologists to perform the complete analysis process of 3D fluorescence images by combining two environments: ImageJ (http://imagej.nih.gov/ij/) for image processing and quantitative analysis and R (http://cran.r-project.org) for statistical processing of measurement results. It includes an intuitive user interface providing the means to precisely build a segmentation procedure and set-up analyses, without possessing programming skills. TANGO is a versatile tool able to process large sets of images, allowing quantitative study of nuclear organization. Availability: TANGO is composed of two programs: (i) an ImageJ plug-in and (ii) a package (rtango) for R. They are both free and open source, available (http://biophysique.mnhn.fr/tango) for Linux, Microsoft Windows and Macintosh OSX. Distribution is under the GPL v.2 licence. Contact: thomas.boudier@snv.jussieu.fr Supplementary information: Supplementary data are available at Bioinformatics online.
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                Author and article information

                Journal
                0410462
                6011
                Nature
                Nature
                Nature
                0028-0836
                1476-4687
                10 December 2019
                05 February 2020
                February 2020
                05 August 2020
                : 578
                : 7794
                : 278-283
                Affiliations
                [1 ]Stem Cell Program, Boston Children’s Hospital, Boston, MA, 02115, USA.
                [2 ]Advanced Microscopy Program, Center for Systems Biology and Wellman Center for Photomedicine, and Center for Regenerative Medicine, Massachusetts General Hospital, Harvard Medical School, Boston, MA, 02114, USA.
                [3 ]Department of Stem Cell And Regenerative Biology, Harvard University, Cambridge, 02138, MA, USA.
                [4 ]Department of Bioengineering, University of California Merced, Merced, CA, 95343, USA.
                [5 ]Department of Biosystems Science and Engineering, ETH Zurich, 4058 Basel, Switzerland.
                [6 ]Department of Molecular Biotechnology and Health Sciences, University of Torino, Torino, 10126, Italy.
                [7 ]Dana Farber/Boston Children’s Cancer and Blood Disorders Center, Howard Hughes Medical Institute, Harvard Medical School, Boston, MA, 02115, USA.
                [8 ]Departments of Biochemistry and Biophysics and of Chemistry, University of Pennsylvania, Philadelphia, PA, 19104, USA.
                [9 ]Department of Pathology and Laboratory Medicine, University of Rochester Medical Center, Rochester, NY, 14642, USA.
                [10 ]Current address: Novartis Institutes for BioMedical Research, Cambridge, MA, 02139, USA.
                Author notes
                [*]

                Equal contribution

                Author Contributions

                C.C. and F.D.C. designed experiments relevant to the animal models. J.A.S. and C.P.L. designed experiments relevant to live animal calvaria BM imaging and fixed calvaria imaging. Y.SCA and C.P.L. designed experiments relevant to imaging of bone cavity types in the calvaria and tibia. K.K.D. and T.S. designed experiments relevant to femur staining and imaging. C.C, A.R., A.S.P., Y.Z. and S.R. generated the mouse models. C.C. performed all animal related experiments and relevant data analysis. R.A.C. and R.P. supervised and performed the bioinformatics analysis respectively. J.A.S. and N.S. performed the live animal calvaria imaging experiments, fixed calvaria imaging, and relevant data analysis. R.T. performed part of the live animal calvaria imaging experiments and relevant data analysis. T.V.E. and S.A.V. generated the pO 2 probe and performed relevant characterization. K.K.D. performed the long bone imaging experiments and data analysis. Y.SCA performed the imaging experiments and analysis of bone cavity types and cell proliferation. S.H.O and G.G. designed the fluidigm experiments. G.G. performed the fluidigm experiments and related analysis. C.C., J.A.S, Y.SCA, C.P.L. and F.D.C. wrote the manuscript. C.P.L. and F.D.C. supervised the project and gave final approval.

                [# ] To whom correspondence should be addressed: fernando.camargo@ 123456childrens.harvard.edu and charles_lin@ 123456hms.harvard.edu
                Article
                NIHMS1546022
                10.1038/s41586-020-1971-z
                7021587
                32025033
                21db0da8-d3fb-45bf-add2-b4c6b6ac7c9a

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