Outbreak caused by pandrug-resistant blaOXA-69/blaOXA-23/blaGES harboring Acinetobacter baumannii ST2 in an intensive care unit

Abstract

Acinetobacter baumannii has emerged as a main nosocomial pathogen exhibiting high rates of resistance to clinically relevant antibiotics. Six pandrug-resistant A. baumannii (PDR- A. baumannii) were recovered from three patients in a Tunisian Intensive Care Unit (ICU) between 10th and 16th of May 2018 resulting in one fatal case and raising the possibility of an outbreak. On 18th of May environmental screening of ICU surfaces was carried out. On 22nd of May a fourth patient was infected with PDR- A. baumannii and died. A second investigation was carried out for environmental screening and PDR- A. baumannii was isolated from the respirator. Antimicrobial susceptibility testing was performed according to EUCAST (2019) guidelines. MIC of colistin was determined by broth microdilution method. PCR was used to detect 14 beta-lactamases/carbapenemases and mcr ( mcr-1 to mcr-5) genes. The genetic relatedness of PDR- A. baumannii isolates was determined by PFGE and MLST. Seven PDR- A. baumannii isolates were recovered from four patients, one MDR strain from wash basin, a PDR strain from hand sanitizer bottle and another PDR strain from respirator. All PDR- A. baumannii ( n = 9) harbored bla _OXA-69 gene and none carried mcr. Moreover, seven carried bla _GES and bla _OXA-23 genes. PFGE identified four pulsotypes (A, B, C, and D) with the pulsotype A gathering seven PDR- A. baumannii isolates: six from three patients and one from hygiene sample. MLST revealed that all PDR- A. baumannii isolates of pulsotype A belonged to the pandemic clone ST2. Systematic screening of MDR and PDR- A. baumannii is highly recommended to limit dissemination of such strains in ICUs.