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Bayesian Evolutionary Analysis with BEAST
monograph
Author(s):
Alexei J. Drummond
,
Remco R. Bouckaert
Publication date
(Online):
2015
Publisher:
Cambridge University Press
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Evolutionary Cell Biology
Author and book information
Book
ISBN:
9781139095112
Publication date (Print):
2015
Publication date (Online):
2015
DOI:
10.1017/CBO9781139095112
SO-VID:
dfd4278f-2046-4ac0-8956-2d638343ded2
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Book chapters
pp. ix
Preface
pp. 3
Introduction
pp. 21
Evolutionary trees
pp. 44
Substitution and site models
pp. 58
The molecular clock
pp. 68
Structured trees and phylogeography
pp. 79
Bayesian evolutionary analysis by sampling trees
pp. 97
Setting up and running a phylogenetic analysis
pp. 116
Estimating species trees from multilocus data
pp. 127
Advanced analysis
pp. 139
Posterior analysis and post-processing
pp. 154
Exploring phylogenetic tree space
pp. 169
Getting started with BEAST 2
pp. 184
BEAST XML
pp. 195
Coding and design patterns
pp. 207
Putting it all together
pp. 220
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