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Software Tools and Algorithms for Biological Systems
other
Editor(s):
Hamid R. Arabnia
,
Quoc-Nam Tran
Publication date
(Print):
2011
Publisher:
Springer New York
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Book
ISBN (Print):
978-1-4419-7045-9
ISBN (Electronic):
978-1-4419-7046-6
Publication date (Print):
2011
DOI:
10.1007/978-1-4419-7046-6
SO-VID:
1064b41c-b49c-4b24-ba22-c5ef085ae311
License:
http://www.springer.com/tdm
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Book chapters
pp. 3
A Technical Platform for Generating Reproducible Expression Data from Streptomyces coelicolor Batch Cultivations
pp. 17
MiRNA Recognition with the yasMiR System: The Quest for Further Improvements
pp. 27
Top Scoring Pair Decision Tree for Gene Expression Data Analysis
pp. 37
Predictive Minimum Description Length Principle Approach to Inferring Gene Regulatory Networks
pp. 45
Parsimonious Selection of Useful Genes in Microarray Gene Expression Data
pp. 57
Hierarchical Signature Clustering for Time Series Microarray Data
pp. 67
Microarray Database Mining and Cell Differentiation Defects in Schizophrenia
pp. 75
miRNA Prediction Using Computational Approach
pp. 83
Improving the Accuracy of Gene Expression Profile Classification with Lorenz Curves and Gini Ratios
pp. 91
Feature Selection in Gene Expression Data Using Principal Component Analysis and Rough Set Theory
pp. 101
Dramatically Reduced Precision in Microarray Analysis Retains Quantitative Properties and Provides Additional Benefits
pp. 113
Algebraic Model Checking for Boolean Gene Regulatory Networks
pp. 123
Comparative Advantages of Novel Algorithms Using MSR Threshold and MSR Difference Threshold for Biclustering Gene Expression Data
pp. 135
Performance Comparison of SLFN Training Algorithms for DNA Microarray Classification
pp. 145
Clustering Microarray Data to Determine Normalization Method
pp. 157
Estimation, Modeling, and Simulation of Patterned Growth in Extreme Environments
pp. 171
Performance of Univariate Forecasting on Seasonal Diseases: The Case of Tuberculosis
pp. 181
Predicting Individual Affect of Health Interventions to Reduce HPV Prevalence
pp. 191
Decision Tree and Ensemble Learning Algorithms with Their Applications in Bioinformatics
pp. 201
Pattern Recognition of Surface EMG Biological Signals by Means of Hilbert Spectrum and Fuzzy Clustering
pp. 211
Rotation of Random Forests for Genomic and Proteomic Classification Problems
pp. 223
Improved Prediction of MHC Class I Binders/Non-Binders Peptides Through Artificial Neural Network Using Variable Learning Rate: SARS Corona Virus, a Case Study
pp. 233
Fast Three-Dimensional Noise Reduction for Real-Time Electron Tomography
pp. 243
Prediction of Chemical-Protein Binding Activity Using Contrast Graph Patterns
pp. 255
Topological Constraint in High-Density Cells’ Tracking of Image Sequences
pp. 263
STRIKE: A Protein–Protein Interaction Classification Approach
pp. 271
Cooperativity of Protein Binding to Vesicles
pp. 279
The Role of Independent Test Set in Modeling of Protein Folding Kinetics
pp. 287
Branch-and-Bound Approach for Parsimonious Inference of a Species Tree from a Set of Gene Family Trees
pp. 297
Sequence-Specific Sequence Comparison Using Pairwise Statistical Significance
pp. 307
Modelling Short Time Series in Metabolomics: A Functional Data Analysis Approach
pp. 317
Modeling of Gene Therapy for Regenerative Cells Using Intelligent Agents
pp. 327
Biomarkers Discovery in Medical Genomics Data
pp. 335
Computer Simulation on Disease Vector Population Replacement Driven by the Maternal Effect Dominant Embryonic Arrest
pp. 345
Leukocytes Segmentation Using Markov Random Fields
pp. 357
Ontology-Based Knowledge Discovery in Pharmacogenomics
pp. 367
Enabling Heterogeneous Data Integration and Biomedical Event Prediction Through ICT: The Test Case of Cancer Reoccurrence
pp. 377
Complexity and High-End Computing in Biology and Medicine
pp. 385
Molecular Modeling Study of Interaction of Anthracenedione Class of Drug Mitoxantrone and Its Analogs with DNA Tetrameric Sequences
pp. 401
A Monte Carlo Analysis of Peritoneal Antimicrobial Pharmacokinetics
pp. 413
Histopathology Tissue Segmentation by Combining Fuzzy Clustering with Multiphase Vector Level Sets
pp. 425
A Dynamically Masked Gaussian Can Efficiently Approximate a Distance Calculation for Image Segmentation
pp. 433
Automatic and Robust System for Correcting Microarray Images’ Rotations and Isolating Spots
pp. 441
Multimodality Medical Image Registration and Fusion Techniques Using Mutual Information and Genetic Algorithm-Based Approaches
pp. 451
Microcalcifications Detection Using Fisher’s Linear Discriminant and Breast Density
pp. 471
An Efficient Algorithm for Denoising MR and CT Images Using Digital Curvelet Transform
pp. 481
On the Use of Collinear and Triangle Equation for Automatic Segmentation and Boundary Detection of Cardiac Cavity Images
pp. 489
The Electromagnetic-Trait Imaging Computation of Traveling Wave Method in Breast Tumor Microwave Sensor System
pp. 497
Medical Image Processing Using Novel Wavelet Filters Based on Atomic Functions: Optimal Medical Image Compression
pp. 505
Cancellation of Artifacts in ECG Signals Using Block Adaptive Filtering Techniques
pp. 515
Segmentation of Medical Image Sequence by Parallel Active Contour
pp. 523
Computerized Decision Support System for Mass Identification in Breast Using Digital Mammogram: A Study on GA-Based Neuro-Fuzzy Approaches
pp. 537
Optimization-Based Technique for Separation and Detection of Saccadic Movements and Eye-Blinking in Electrooculography Biosignals
pp. 547
A Framework for Lipoprotein Ontology
pp. 555
Verbal Decision Analysis Applied on the Optimization of Alzheimer’s Disease Diagnosis: A Case Study Based on Neuroimaging
pp. 565
Asynchronous Brain Machine Interface-Based Control of a Wheelchair
pp. 573
Toward an Application to Psychological Disorders Diagnosis
pp. 581
Enhancing Medical Research Efficiency by Using Concept Maps
pp. 589
Analysis of Neural Sources of P300 Event-Related Potential in Normal and Schizophrenic Participants
pp. 599
Design and Development of a Tele-Healthcare Information System Based on Web Services and HL7 Standards
pp. 607
Fuzzy Logic Based Expert System for the Treatment of Mobile Tooth
pp. 615
A Microcomputer FES System for Wrist Moving Control
pp. 623
Computer-Aided Decision System for the Clubfeet Deformities
pp. 637
A Framework for Specifying Safe Behavior of the CIIP Medical System
pp. 647
Lotka–Volterra System with Volterra Multiplier
pp. 657
A Biological Compression Model and Its Applications
pp. 667
Open Source Clinical Portals: A Model for Healthcare Information Systems to Support Care Processes and Feed Clinical Research
pp. 679
Analysis and Clustering of MicroRNA Array: A New Efficient and Reliable Computational Method
pp. 689
Stochastic Simulations of Mixed-Lipid Compartments: From Self-Assembling Vesicles to Self-Producing Protocells
pp. 697
A New Genetic Algorithm for Polygonal Approximation
pp. 709
Challenges When Using Real-World Bio-data to Calibrate Simulation Systems
pp. 717
Credibility of Digital Content in a Healthcare Collaborative Community
pp. 725
Using Standardized Numerical Scores for the Display and Interpretation of Biomedical Data
pp. 733
ImagCell: A Computer Tool for Cell Culture Image Processing Applications in Bioimpedance Measurements
pp. 741
From Ontology Selection and Semantic Web to an Integrated Information System for Food-borne Diseases and Food Safety
pp. 751
Algebraic Analysis of Social Networks for Bio-surveillance: The Cases of SARS-Beijing-2003 and AH1N1 Influenza-México-2009
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